species:   Fugra
pid:       PID0931
parent:    FgmilR-7dps-80
paralog:   
locus:     NC_026477.1:489317-489443
matures:   ['GAAUCGGAUGGAUAGGCGGAGCC', 'AGUCCGCGGGCGUCGACCGAAUCCC']
srr:       SRR6516244
genome:    /Users/jax/+Genomes/Fungal_genomes/Fugra.GCF_000240135.3_ASM24013v3_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516244.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516244.cram NC_026477.1:489317-489443

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

           ***************************                                                      *************************          
GCCGCAGCCUCGCAGUCCGCGGGCGUCGACCGAAUCCCCAACAUUGUUUUUGCUCUCCCGGCAUUGGUUUGGAUCCCAGAUCUUUGGUAGUAGGGAAUCGGAUGGAUAGGCGGAGCCGAAGCUCGGC
((((.(((.(((...(((((....(((.(((((.((((............((((.....(.((..(((((((...)))))))..)).))))))))).)))).).)))..)))))..))).)))))))
----------------------------------------------------------------------------------------------GAAUCGGAUGGAUAGGCGGAGCC---------- l=23 a=0 c
-------------AGUCCGCGGGCGUCGACCGAAUCCC----------------------------------------------------------------------------------------- l=25 a=0 c*
----------------------------------------------------------------------------------------------GAAUCGGAUGGAUAGGCGGAGCC---------- l=23 a=0 ma
-------------AGUCCGCGGGCGUCGACCGAAUCCC----------------------------------------------------------------------------------------- l=25 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-000110001100
fn-001
